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Accession: PRJNA174601 ID: 174601

sediment metagenome

Wadden Sea sediment Metagenome

Metagenome shotgun sequencing (454) of total DNA extracted from surface sediment of a Wadden Sea tidal flat ("Janssand" flat, Germany) at low tide, at different dates; main focus of the study on microbial diversity (taxonomic and functional) of the habitat.
AccessionPRJNA174601
Data TypeMetagenome
ScopeEnvironment
Organismsediment metagenome[Taxonomy ID: 749907]
unclassified sequences; metagenomes; ecological metagenomes; sediment metagenome
Publications
  • Published online: Hanke A et al., "Recoding of the stop codon UGA to glycine by a BD1-5/SN-2 bacterium and niche partitioning between Alpha- and Gammaproteobacteria in a tidal sediment microbial community naturally selected in a laboratory chemostat", Frontiers in Microbiology, 2014;5
SubmissionRegistration date: 7-Sep-2012
Bielefeld University
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments4
Other datasets
BioSample4
SRA Data Details
ParameterValue
Data volume, Gbases1
Data volume, Mbytes3127

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