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Accession: PRJNA174401 ID: 174401

Fusarium oxysporum f. sp. cubense

Genome Sequencing and Comparative Transcriptomics of Race1 and Race4 of Banana pathogen: Fusarium oxysporum f.sp. Cubense

See Genome Information for Fusarium oxysporum
Deep sequencing of mRNA from Fusarium oxysporum f. sp. Cubense 1 and 4 after infecting Musa acuminata 0h and 48h. Overall design: Analysis of ploy(A)+ RNA of different hours after infecting of Musa acuminata
AccessionPRJNA174401; GEO: GSE40581
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismFusarium oxysporum f. sp. cubense[Taxonomy ID: 61366]
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium oxysporum species complex; Fusarium oxysporum; Fusarium oxysporum f. sp. cubense
PublicationsGuo L et al., "Genome and transcriptome analysis of the fungal pathogen Fusarium oxysporum f. sp. cubense causing banana vascular wilt disease.", PLoS One, 2014;9(4):e95543
SubmissionRegistration date: 4-Sep-2012
EasyATCG
RelevanceUnknown
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments4
Publications
PubMed1
PMC1
Other datasets
BioSample4
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes185
SRA Data Details
ParameterValue
Data volume, Gbases13
Data volume, Mbytes9006

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