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Accession: PRJNA172741 ID: 172741

Homo sapiens (human)

Short-term time course of the effects of 1α,25-dihydroxyvitamin D3 treatment on open chromatin regions in THP-1 monocytic leukemia cells

See Genome Information for Homo sapiens
Open chromatin regions have been shown to associate with the location of transcriptiotal enhancers, i. More...
AccessionPRJNA172741; GEO: GSE40075
Data TypeEpigenomics
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
Publications
  • Seuter S et al., "Chromatin acetylation at transcription start sites and vitamin D receptor binding regions relates to effects of 1α,25-dihydroxyvitamin D3 and histone deacetylase inhibitors on gene expression.", Nucleic Acids Res, 2013 Jan 7;41(1):110-24
  • Seuter S et al., "Dynamics of 1α,25-dihydroxyvitamin D3-dependent chromatin accessibility of early vitamin D receptor target genes.", Biochim Biophys Acta, 2013 Dec;1829(12):1266-75
SubmissionRegistration date: 13-Aug-2012
Institute of Biomedicine, University of Eastern Finland
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments9
Publications
PubMed2
PMC1
Other datasets
BioSample9
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes9
SRA Data Details
ParameterValue
Data volume, Gbases13
Data volume, Mbytes8137

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