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Accession: PRJNA17241 ID: 17241

epibiont metagenome

Hydrothermal vent epibiont community associated with Alvinella pompejana

The deep-sea hydrothermal vent polychaete Alvinella pompejana maintains a diverse microbial consortia on the worm's dorsal integument that is dominated (>95%) by members of the epsilon Proteobacteria. More...
AccessionPRJNA17241
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismepibiont metagenome[Taxonomy ID: 408171]
unclassified sequences; metagenomes; organismal metagenomes; epibiont metagenome
PublicationsGrzymski JJ et al., "Metagenome analysis of an extreme microbial symbiosis reveals eurythermal adaptation and metabolic flexibility.", Proc Natl Acad Sci U S A, 2008 Nov 11;105(45):17516-21
SubmissionRegistration date: 12-Nov-2008
- University of Delaware/Desert Research Institute
- Desert Research Institute
- Symbio, Inc.
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Locus Tag PrefixA1K
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)253
WGS master1
Genomic DNA252
SRA Experiments12
Capillary Traces (Trace Archive)1
Publications
PubMed1
PMC1
Other datasets
BioSample2
PopSet1
Assembly1
Assembly details:
AssemblyLevelWGSBioSampleTaxonomy
GCA_000206165.1ContigAAUQ00000000SAMN02954288
epibiont metagenome
SRA Data Details
ParameterValue
Data volume, Mbases290
Data volume, Mbytes9805

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