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Accession: PRJNA170936 ID: 170936

Arabidopsis thaliana (thale cress)

smRNAs generated by single-stranded and double-stranded silencers

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5935 additional projects are related by organism.
To investigate possible smRNAs linked to TMM silencing by single-stranded and double-stranded silencers, we determined sequences of smRNAs by the Illumina high-throughput sequencing platform and compared silencing efficiency of different strategies. More...
AccessionPRJNA170936; GEO: GSE39398
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismArabidopsis thaliana[Taxonomy ID: 3702]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana
PublicationsDeng S et al., "Transcriptional silencing of Arabidopsis endogenes by single-stranded RNAs targeting the promoter region.", Plant Cell Physiol, 2014 Apr;55(4):823-33
SubmissionRegistration date: 16-Jul-2012
Chua Nam-Hai, The Rockefeller University
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RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments8
Publications
PubMed1
Other datasets
BioSample8
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases1
Data volume, Mbytes809

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