This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA170840; GEO: GSE39418 |
| Type | Umbrella project |
| Publications | Magnani L et al., "Genome-wide reprogramming of the chromatin landscape underlies endocrine therapy resistance in breast cancer.", Proc Natl Acad Sci U S A, 2013 Apr 16;110(16):E1490-9 |
| Submission | Registration date: 17-Jul-2012
Lupien, Genetics, Dartmouth College |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 9 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 9 |
| GEO DataSets | 4 |
GEO Data Details| Parameter | Value |
|---|
| Data volume, Spots | 944620 |
| Data volume, Processed Mbytes | 23 |
| Data volume, Supplementary Mbytes | 11 |
| Parameter | Value |
|---|
| Data volume, Gbases | 11 |
| Data volume, Mbytes | 6296 |
This project encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJNA159579 | Homo sapiens | Genome-wide reprogramming of the chromatin landscape underlies endocrine therapy resistance in breast cancer (Dartmouth Medical School) |
|
| Transcriptome or Gene expression | 2 |
BioProject
accession | Organism | Title |
|---|
| PRJNA170843 | Homo sapiens | Expression profile of the endocrine therapy sensitive breast cancer cells MCF7 depleted of PBX1 (Lupien, Genetics, Dartmouth...) | | PRJNA157103 | Homo sapiens | Expression profile of the endocrine therapy resistant breast cancer cells LTED depleted of PBX1 or treated with the gamma-secretase inhibitor MRK003 (Lupien, Genetics, Dartmouth...) |
|