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Accession: PRJNA169395 ID: 169395

Arabidopsis thaliana (thale cress)

Active DNA demethylation in plant companion cells reinforces transposon methylation in gametes

See Genome Information for Arabidopsis thaliana
The Arabidopsis thaliana central cell, the companion cell of the egg, undergoes DNA demethylation prior to fertilization, but the targeting preferences and biological significance of this process remain unclear. More...
AccessionPRJNA169395; GEO: GSE38935
Data TypeEpigenomics
ScopeMultiisolate
OrganismArabidopsis thaliana[Taxonomy ID: 3702]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana
PublicationsIbarra CA et al., "Active DNA demethylation in plant companion cells reinforces transposon methylation in gametes.", Science, 2012 Sep 14;337(6100):1360-1364
SubmissionRegistration date: 26-Jun-2012
Daniel Zilberman, Plant and Microbial Biology, University of California at Berkeley
NCBI Links
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments10
Publications
PubMed1
PMC1
Other datasets
BioSample10
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes4351
SRA Data Details
ParameterValue
Data volume, Gbases128
Data volume, Mbytes82921

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