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Accession: PRJNA168462 ID: 168462

Homo sapiens (human)

DNA Methylation in IMR90 cells

See Genome Information for Homo sapiens
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This project is a component of the Normal and Cancerous Prostate Cells
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6 additional projects are components of the Normal and Cancerous Prostate Cells.
66644 additional projects are related by organism.
DNA methylation was measured by MBD2 enrichment of DNA fragments in IMR90. A statistical model was developed to estimate absolute methylation levels, and compared to whole genome bisulfite sequencing results (Lister, R. More...
AccessionPRJNA168462; GEO: GSE38679
Data TypeEpigenomics
ScopeMonoisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsBert SA et al., "Regional activation of the cancer genome by long-range epigenetic remodeling.", Cancer Cell, 2013 Jan 14;23(1):9-22
SubmissionRegistration date: 13-Jun-2012
Epigenetics Research Laboratory, Cancer Department, Garvan Institute of Medical Research
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments1
Publications
PubMed1
Other datasets
BioSample1
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes457
SRA Data Details
ParameterValue
Data volume, Gbases1
Data volume, Mbytes893

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