See
Genome Information for Mus musculus
RRP1B is a Metastasis Modifier that Regulates the Transcriptome through mRNA Splicing
Overall design: To assess the role of RRP1B in alternative mRNA splicing, we knocked down the expression of Rrp1b in the highly metastatic mouse mammary tumor cell line Mvt-1 using shRNA. Two control and two knockdown stable cell lines were selected for RNA-sequencing.
| Accession | PRJNA168458; GEO: GSE38669 |
| Data Type | Transcriptome or Gene expression |
| Scope | Multiisolate |
| Organism | Mus musculus[Taxonomy ID: 10090] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus |
| Publications | Lee M et al., "RRP1B is a metastasis modifier that regulates the expression of alternative mRNA isoforms through interactions with SRSF1.", Oncogene, 2014 Apr 3;33(14):1818-27 |
| Submission | Registration date: 12-Jun-2012
Human Genome Research Institute |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
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| Sequence data |
| SRA Experiments | 4 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 4 |
| GEO DataSets | 1 |