This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA168155; GEO: GSE38571 |
| Type | Umbrella project |
| Publications | - Marconett CN et al., "Transcriptomic Profiling of Primary Alveolar Epithelial Cell Differentiation in Human and Rat.", Genom Data, 2014 Dec 1;2:105-109
- Marconett CN et al., "Integrated transcriptomic and epigenomic analysis of primary human lung epithelial cell differentiation.", PLoS Genet, 2013 Jun;9(6):e1003513
|
| Submission | Registration date: 7-Jun-2012
Crystal Marconett, Biochemistry & Molecular Biology, University of Southern California |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 6 |
| Publications |
| PubMed | 2 |
| PMC | 2 |
| Other datasets |
| BioSample | 6 |
| GEO DataSets | 4 |
GEO Data Details| Parameter | Value |
|---|
| Data volume, Spots | 1140772 |
| Data volume, Processed Mbytes | 37 |
| Data volume, Supplementary Mbytes | 2132 |
| Parameter | Value |
|---|
| Data volume, Gbases | 8 |
| Data volume, Mbytes | 4542 |
Integrated transcriptomic and epigenomic analysis of primary human lung cell differentiation encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJNA173869 | Homo sapiens | Integrated transcriptomic and epigenomic analysis of primary human lung cell differentiation (ChIP-Seq) (Crystal Marconett, Biochemistry...) |
|
| Transcriptome or Gene expression | 2 |
BioProject
accession | Organism | Title |
|---|
| PRJNA168174 | Homo sapiens | Integrated transcriptomic and epigenomic analysis of primary human lung cell differentiation (Human) (Crystal Marconett, Biochemistry...) | | PRJNA168175 | Rattus norvegicus | Integrated transcriptomic and epigenomic analysis of primary human lung cell differentiation (Rat) (Crystal Marconett, Biochemistry...) |
|