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Accession: PRJNA168014 ID: 168014

Transcriptome and methylome interactions in rice hybrids

This research reports genome-wide measurements of genetic and epigenetic patterns of inheritance through an integrative analysis of BS-seq, RNA-seq, and siRNA-seq data in two inbred parents of the Nipponbare (NPB) and Indica (93-11) variety of rice and their hybrid offspring. More...
AccessionPRJNA168014; GEO: GSE38480
ScopeMultispecies
PublicationsChodavarapu RK et al., "Transcriptome and methylome interactions in rice hybrids.", Proc Natl Acad Sci U S A, 2012 Jul 24;109(30):12040-5
SubmissionRegistration date: 10-Jul-2012
Meyers lab, Donald Danforth Plant Science Center
RelevanceUnknown
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments12
Publications
PubMed1
PMC1
Other datasets
BioSample12
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes5001
SRA Data Details
ParameterValue
Data volume, Gbases144
Data volume, Mbytes93383

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