Sign in to NCBI

Display Settings:

Format

Send to:

Choose Destination
Accession: PRJNA167797 ID: 167797

Homo sapiens (human)

Hi-seq 2000 sequencing facilitates quantitative analysis of transcriptomes in LNCaP cells with or without SiGATA2 treatment.

See Genome Information for Homo sapiens
Navigate Up
This project is a component of the A Class of H3K4me1/H3K9me2 marked active GATA2 enhancers directs a GATA2-dependent transcription program underlying prostate cancer progression.
Navigate Across
1 additional project is a component of the A Class of H3K4me1/H3K9me2 marked active GATA2 enhancers directs a GATA2-dependent transcription program underlying prostate cancer progression..
66644 additional projects are related by organism.
We obtained 1,367 GATA2 up-regulated and 759 GATA2 down-regulated genes (p< 0.001). Overall design: mRNA profiles of LNCaP cell treated with or without SiGATA2 were generated by deep sequencing in duplicate using Hi-Seq 2000.
AccessionPRJNA167797; GEO: GSE38393
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
SubmissionRegistration date: 1-Jun-2012
Department of Molecular Medicine, The University of Texas Health Science Center at San Antonio
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments4
Other datasets
BioSample4
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases10
Data volume, Mbytes6299

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI
Support Center