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Accession: PRJNA167349 ID: 167349

Critical role of SOX17 in the hematopoietic development from human embryonic stem cells

Human embryonic stem cells (hESCs) are a powerful tool for modeling regenerative therapy. To search for the genes that promote hematopoietic development from human pluripotent stem cell, we overexpressed a list of hematopoietic regulator genes in human pluripotent stem cell-derived CD34+CD43- endothelial cells (ECs) enriched in hemogenic endothelium. Among genes tested, only SOX17, a gene encoding a transcription factor of the SOX family, promoted cell growth and supported expansion of CD34+CD43+CD45-/low cells expressing a hemogenic endothelial maker VE-cadherin. SOX17 was highly expressed in CD34+CD43- ECs but at a low level in CD34+CD43+CD45- pre-hematopoietic progenitor cells (pre-HPCs) and CD34+CD43+CD45+ HPCs. SOX17-overexpressing cells formed sphere-like colonies and generated few hematopoietic progenies. More...
AccessionPRJNA167349; GEO: GSE38156
TypeUmbrella project
PublicationsNakajima-Takagi Y et al., "Role of SOX17 in hematopoietic development from human embryonic stem cells.", Blood, 2013 Jan 17;121(3):447-58
SubmissionRegistration date: 23-May-2012
Laboratory for Integrative Genomics, IMS, RIKEN
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Project Data:
Resource NameNumber
of Links
Publications
PubMed1
Other datasets
GEO DataSets3
GEO Data Details
ParameterValue
Data volume, Spots1547870
Data volume, Processed Mbytes32
Data volume, Supplementary Mbytes352
This project encompasses the following 2 sub-projects:
Project TypeNumber of Projects
Epigenomics1
BioProject
accession
OrganismTitle
PRJNA167298Homo sapiensChIP-on-chip data from human ES cells-derived CD34+CD43+CD45low cells (hemogenic endothelium-like cells) overexpressing 3xFLAG-Sox17-ERT (Laboratory for Immunogenomics,...)
Transcriptome or Gene expression1
BioProject
accession
OrganismTitle
PRJNA167301Homo sapiensExpression data of human ES cells-derived CD34+CD43+CD45low cells (hemogenic endothelium-like cells) expanded upon overexpression of Sox17 (Laboratory for Integrative...)

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