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Accession: PRJNA163973 ID: 163973

i5k Arthropod Genome Pilot Project (arthropods)

BCM-HGSC preparation of draft assemblies for 50 arthropod species as a kick off of the i5k sequencing effort. Species will include Common House Spider, Brown Recluse Spider, Dung Beetle, and Bed Bug.
AccessionPRJNA163973
TypeUmbrella project (Subtype:Funding initiative)
OrganismArthropoda[Taxonomy ID: 6656]
Eukaryota; Metazoa; Ecdysozoa; Arthropoda
SubmissionRegistration date: 9-May-2012
i5k Consortium
Related Resources
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)821293
WGS master32
Transcript403384
SRA Experiments200
Protein Sequences402341
Publications
PubMed33
PMC10
Other datasets
BioSample126
Assembly32
SRA Data Details
ParameterValue
Data volume, Gbases5,285
Data volume, Tbytes3.59
i5k Arthropod Genome Pilot Project encompasses the following 74 sub-projects:
Project TypeNumber of Projects
Genome sequencing

1
45
1
2
49
BioProject
accession
Assembly
level
NameTitle
PRJNA203291 No data linksAcerentomon maiusAcerentomon maius Genome sequencing (The i5k Initiative)
PRJNA230921 ScaffoldsAgrilus planipennisWhole genome sequencing, assembly and annotation of Agrilus planipennis (The BCM-HGSC i5K pilot project)
PRJNA343475 ScaffoldsAgrilus planipennisAgrilus planipennis RefSeq Genome sequencing (NCBI)
PRJNA167479 ScaffoldsAnoplophora glabripennisAnoplophora glabripennis isolate:ALB-LARVAE Genome sequencing and assembly (The i5k Initiative)
PRJNA348318 ScaffoldsAnoplophora glabripennisAnoplophora glabripennis RefSeq Genome sequencing (NCBI)
List all 49 'Genome sequencing' projects...
transcriptome25
BioProject
accession
OrganismTitle
PRJNA271706Agrilus planipennisAgrilus planipennis RNAseq (Baylor College of Medicine...)
PRJNA274806Anoplophora glabripennisAnoplophora glabripennis RNAseq (Baylor College of Medicine)
PRJNA275665Athalia rosaeAthalia rosae RNAseq (Baylor College of Medicine)
PRJNA275759Centruroides sculpturatusCentruroides sculpturatus RNAseq (Baylor College of Medicine)
PRJNA198743Ceratitis capitataCeratitis capitata RNAseq (The i5k Initiative)
List all 25 'transcriptome' projects...

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