See
Genome Information for Mammuthus primigenius
The woolly mammoth Mammuthus primigenius existed in the late Pleistocene era across Asia, Europe, and North America. Mammuthus primigenius went extinct about 10,000 years ago and is now one of a few species studied in the field of paleogenomics.
| Accession | PRJNA16316 |
| Type | Umbrella project |
| Organism | Mammuthus primigenius[Taxonomy ID: 37349] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Mammuthus; Mammuthus primigenius |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 17 |
| WGS master | 1 |
| Genomic DNA | 16 |
| SRA Experiments | 31 |
| Capillary Traces (Trace Archive) | 1 |
| Protein Sequences | 208 |
| Publications |
| PubMed | 5 |
| PMC | 3 |
| Other datasets |
| BioSample | 25 |
| Assembly | 1 |
Mammuthus primigenius encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Scaffolds SRA or Trace Total |
1
1
2
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJNA31119 | SRA or Trace | Mammuthus primigenius | Woolly Mammoth whole genome sequencing project (CCGB) | | PRJNA17621 | Scaffolds | fossil metagenome | Patterns of nucleotide misincorporations during enzymatic amplification and direct large-scale sequencing of ancient DNA. (Max Planck Institute) |
|
| metagenome | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJNA16317 | fossil metagenome | Sequencing of woolly mammoth environmental sample (CCGB, Penn State University) |
|