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Accession: PRJNA157121 ID: 157121

Arabidopsis thaliana (thale cress)

Small RNA sequencing in Arabidopsis plants

See Genome Information for Arabidopsis thaliana
Identification of microRNA expressed in Arabidopsis plants grown at different ambient CO2 concentrations and different ambient temperatures Overall design: Small RNA sequencing of Arabidopsis wild type ecotype Columbia (Col-0) rossette leaves at bolting stage grown at 430 ± 50ppm and 810 ± 50ppm CO2 concentrations and 22 ± 0.5oC and 28 ± 0.5oC temperatures
AccessionPRJNA157121; GEO: GSE36934
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismArabidopsis thaliana[Taxonomy ID: 3702]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana
PublicationsMay P et al., "The effects of carbon dioxide and temperature on microRNA expression in Arabidopsis development.", Nat Commun, 2013;4:2145
SubmissionRegistration date: 29-Mar-2012
Bioinformatics Core, Luxembourg Centre for Systems Biomedicine, University of Luxembourg
NCBI Links
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments6
Publications
PubMed1
Other datasets
BioSample6
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes79
SRA Data Details
ParameterValue
Data volume, Gbases2
Data volume, Mbytes1489

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