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Accession: PRJNA156657 ID: 156657

Glycine max (soybean)

Deep sequencing of the degradome cDNA library in soybean

See Genome Information for Glycine max
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This project is a component of the Deep sequencing of small RNAs and degradome cDNA library in soybean
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1 additional project is a component of the Deep sequencing of small RNAs and degradome cDNA library in soybean.
911 additional projects are related by organism.
We deep sequenced a degradome library constructed from different soybean tissues. More...
AccessionPRJNA156657; GEO: GSE33379
Data TypeTranscriptome or Gene expression
ScopeMonoisolate
OrganismGlycine max[Taxonomy ID: 3847]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja; Glycine max
Publications
  • Han YQ et al., "Analysis of promoters of microRNAs from a Glycine max degradome library.", J Zhejiang Univ Sci B, 2014 Feb;15(2):125-32
  • Zheng H et al., "Prediction and identification of natural antisense transcripts and their small RNAs in soybean (Glycine max).", BMC Genomics, 2013 Apr 24;14:280
SubmissionRegistration date: 2-Nov-2011
Chinese Academy of Agricultural Sciences
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments1
Publications
PubMed2
PMC2
Other datasets
BioSample1
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Spots1977043
Data volume, Processed Mbytes46
SRA Data Details
ParameterValue
Data volume, Gbases1
Data volume, Mbytes412

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