See
Genome Information for Triticum aestivum
The International Wheat Genome Sequencing Consortium (IWGSC) is a collaboration of wheat researchers from the world. The long-term goal of the IWGSC is to obtain a high quality reference sequence of bread wheat cultivar Chinese Spring. There are three approaches being used: 1) low coverage survey sequencing of all 21 chromosomes using now-Gen sequencing techniques on sorted chromosomes and chromosome arms, 2) BAC end sequencing of clones used to construct physical maps and 3) BAC-by-BAC sequencing for high quality sequence of entire chromosomes.
| Accession | PRJNA15528 |
| Type | Umbrella project (Subtype:Single organism discovery) |
| Organism | Triticum aestivum[Taxonomy ID: 4565] Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum; Triticum aestivum |
| Publications | - Paux E et al., "A physical map of the 1-gigabase bread wheat chromosome 3B.", Science, 2008 Oct 3;322(5898):101-4
- Munkvold JD et al., "Group 3 chromosome bin maps of wheat and their relationship to rice chromosome 1.", Genetics, 2004 Oct;168(2):639-50
|
| Submission | Registration date: 1-Aug-2005
International Wheat Genome Sequencing Consortium |
| Related Resources | |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 9 |
| WGS master | 1 |
| Genomic DNA | 8 |
| SRA Experiments | 2 |
| Protein Sequences | 23 |
| Publications |
| PubMed | 7 |
| PMC | 2 |
| Other datasets |
| BioSample | 4 |
| Assembly | 2 |
Triticum aestivum encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Contigs No data links Total |
1
1
1
3
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJEA41525 | Chromosomes | Triticum aestivum | Chromosome 3B of Triticum aestivum sequencing project (International Wheat Genome...) | | PRJNA61773 | Contigs | Triticum aestivum | Triticum aestivum strain:Chinese Spring Genome sequencing and assembly (International Wheat Genome...) | | PRJNA77945 | No data links | Triticum aestivum | Triticum aestivum strain:Chinese Spring Genome sequencing (IAS-CSIC) |
|