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Accession: PRJNA154771 ID: 154771

Mus musculus (house mouse)

RNA mapping of Drosha deficient cells

See Genome Information for Mus musculus
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This project is a component of the RNA mapping of Drosha deficient cells, chromatin maps of mature T cells, and miRNA profiling of lymphopoiesis
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2 additional projects are components of the RNA mapping of Drosha deficient cells, chromatin maps of mature T cells, and miRNA profiling of lymphopoiesis.
47588 additional projects are related by organism.
Here we show the microRNA genes can been very large and displaying many summarizing structural characteristics Overall design: MicroRNA biogenesis was ablated in CD4+ and CD8+ by deleted Rnasen gene (encoding Drosha). Poly A RNAs were extracted and analyzed by ultra high throughput sequencing
AccessionPRJNA154771; GEO: GSE30578
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsKirigin FF et al., "Dynamic microRNA gene transcription and processing during T cell development.", J Immunol, 2012 Apr 1;188(7):3257-67
SubmissionRegistration date: 12-Jul-2011
St Vincent's Institute of Medical Research
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments4
Publications
PubMed1
PMC1
Other datasets
BioSample4
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes138
SRA Data Details
ParameterValue
Data volume, Gbases4
Data volume, Mbytes4694

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