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Accession: PRJNA13184 ID: 13184

Pan troglodytes (chimpanzee)

The chimpanzee sequencing consortium used a whole genome shotgun method to sequence the chimp genome

See Genome Information for Pan troglodytes
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36 additional projects are related by organism.

A genome consortium sequenced the Pan troglodytes, chimpanzee, genome. The whole genome shotgun (WGS) sequencing has been completed to an assembled size of 3. More...

AccessionPRJNA13184
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismPan troglodytes[Taxonomy ID: 9598]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan; Pan troglodytes
Publications (total 6)
More...
SubmissionRegistration date: 16-Nov-2004
Chimpanzee Sequencing and Analysis Consortium
- Washington University Genome Sequencing Center
- Broad Institute
- Chimpanzee Sequencing Consortium
Locus Tag PrefixAGS46
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)15387
WGS master2
Genomic DNA11084
SRA Experiments4
Publications
PubMed6
PMC2
Other datasets
BioSample5
Assembly2
Assembly details:
Assembly levelNumber of Assemblies
Chromosome Chromosome
Contig Contig
Total
1
1
2
AssemblyLevelWGSChrsBioSampleIsolateTaxonomy
GCA_000325845.1ContigAADA00000000
SAMN02981217
Yerkes chimp pedigree #C0471 (Clint)
Pan troglodytes
GCA_000001515.5ChromosomeAACZ00000000
25
SAMN02981217
Yerkes chimp pedigree #C0471 (Clint)
Pan troglodytes
SRA Data Details
ParameterValue
Data volume, Mbases94
Data volume, Mbytes81
Related RefSeq Project
PRJNA10627 : Reference genome sequence for Pan troglodytes

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