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Accession: PRJNA12658 ID: 12658

Leishmania infantum JPCM5

The causal agent of visceral leishmaniasis in the Old World

See Genome Information for Leishmania infantum
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18 additional projects are related by organism.

A whole genome shotgun sequence of Leishmania infantum clone JPCM5 was generated to ~ 5x coverage (completed in October 2003) by a consortium of research institutes, namely The Sanger Institute, Imperial College and University of Glasgow. More...

AccessionPRJNA12658
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismLeishmania infantum JPCM5[Taxonomy ID: 435258]
Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania infantum; Leishmania infantum JPCM5
Publications
  • Rogers MB et al., "Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.", Genome Res, 2011 Dec;21(12):2129-42
  • Peacock CS et al., "Comparative genomic analysis of three Leishmania species that cause diverse human disease.", Nat Genet, 2007 Jul;39(7):839-47
SubmissionRegistration date: 8-Nov-2011
The Sanger Institute
Related Resources
Locus Tag PrefixLINJ
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)65
WGS master1
Genomic DNA36
Protein Sequences8150
Publications
PubMed2
PMC2
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSChrsBioSampleTaxonomy
GCA_000002875.2ChromosomeCACT00000000
36
SAMEA3138175
Leishmania infantum JPCM5
Related RefSeq Project
PRJNA19187 : A protozoan that can cause the disease Leishmaniasis

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