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Accession: PRJNA12603 ID: 12603

Trichinella spiralis strain:ISS 195

Trichinella spiralis genome sequencing project

See Genome Information for Trichinella spiralis
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This project is a component of the Studies to help develop parasitic nematode control programs
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6 additional projects are related by organism.
16 additional projects are components of the Studies to help develop parasitic nematode control programs.
A whole genome shotgun sequencing project under accession ABIR00000000 corresponding to Trichinella spirallis has been submitted to GenBank. More...
AccessionPRJNA12603
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismTrichinella spiralis[Taxonomy ID: 6334]
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia; Trichinellida; Trichinellidae; Trichinella; Trichinella spiralis
Publications
  • Thompson PC et al., "Long-read sequencing improves assembly of Trichinella genomes 10-fold, revealing substantial synteny between lineages diverged over 7 million years.", Parasitology, 2017 Sep;144(10):1302-1315
  • Mitreva M et al., "The draft genome of the parasitic nematode Trichinella spiralis.", Nat Genet, 2011 Mar;43(3):228-35
SubmissionRegistration date: 14-Dec-2007
Washington University School of Medicine
Related Resources
Locus Tag PrefixTSP
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)4
WGS master1
Publications
PubMed2
PMC1
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSChrsBioSampleTaxonomy
GCA_000181795.3ChromosomeABIR00000000
3
SAMN02953711
Trichinella spiralis
Related RefSeq Project
PRJNA66457 : Trichinella spiralis genome sequencing project

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