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Accession: PRJNA119 ID: 119

Solanum lycopersicum cultivar:Heinz 1706 (tomato)

Sequencing of the tomato genome by the international consortium

See Genome Information for Solanum lycopersicum
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This project is a component of the Solanum lycopersicum SuperSeries
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707 additional projects are related by organism.
1 additional project is a component of the Solanum lycopersicum SuperSeries.

Sequencing of the tomato genome will be done by an international consortium of researchers as part of the Solanaceae Genomics Project. More...

AccessionPRJNA119
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismSolanum lycopersicum[Taxonomy ID: 4081]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon; Solanum lycopersicum
Publications
  • Wang Y et al., "Characteristics of the tomato nuclear genome as determined by sequencing undermethylated EcoRI digested fragments.", Theor Appl Genet, 2005 Dec;112(1):72-84
  • Budiman MA et al., "A deep-coverage tomato BAC library and prospects toward development of an STC framework for genome sequencing.", Genome Res, 2000 Jan;10(1):129-36
SubmissionRegistration date: 10-Dec-2010
Solanaceae Genomics Project
- Boyce Thompson Institute for Plant Research, USA, Ithaca
- Cornell University
Related Resources
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)13
WGS master1
SRA Experiments12
Publications
PubMed2
PMC1
Other datasets
BioSample13
Assembly1
Assembly details:
AssemblyLevelWGSChrsBioSampleTaxonomy
GCA_000188115.3ChromosomeAEKE00000000
12
SAMN02981290
Solanum lycopersicum
SRA Data Details
ParameterValue
Data volume, Gbases67
Data volume, Mbytes51836
Related RefSeq Project
PRJNA66163 : tomato genome RefSeq project

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