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Genome Information for Fusarium graminearum
The genetic map of
Gibberella zeae lineage 7 was constructed using a cross between the type strain PH-1 (NRRL 31084) and a strain from Minnesota, 00-676 (NRRL 34097).
More...The genetic map of
Gibberella zeae lineage 7 was constructed using a cross between the type strain PH-1 (NRRL 31084) and a strain from Minnesota, 00-676 (NRRL 34097). Cytological examination of parental strains indicated that each have four chromosomes. A total of 112 random ascospore progeny were analyzed for 122 genetic loci; 110 of the markers exhibited Mendelian inheritance.
Genetic markers consist of single nucleotide polymorphisms (n=66), RFLPs (n= 29), and microsatellites (n=27). Most SNPs and RFLPs were identified by sequencing alleles derived from EST loci for both parental strains; others were based on sequences at the ends of smaller scaffolds. One EST-based marker (HK235) and a marker based on the major ribosomal RNA repeat were not represented in the assembly but both map to linkage group 9 on chromosome 4. Microsatellites were obtained from a genome-wide scan for simple tandem repeats by the method of Benson (Nucleic Acids Res. 27:573-580, 1999) and then used for polymorphism screening at selected loci.
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| Accession | PRJNA10693 |
| Data Type | Map |
| Scope | Monoisolate |
| Organism | Fusarium graminearum PH-1[Taxonomy ID: 229533] Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium graminearum; Fusarium graminearum PH-1 |
| Publications | Gale LR et al., "Chromosome complement of the fungal plant pathogen Fusarium graminearum based on genetic and physical mapping and cytological observations.", Genetics, 2005 Nov;171(3):985-1001 |
| Submission | Registration date: 1-Apr-2004
Gale and Kistler |
Project Data:
| Resource Name | Number
of Links |
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| Publications |
| PubMed | 1 |
| PMC | 1 |
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