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ASM14989v1

Organism name:
Coccidioides immitis RMSCC 2394 (ascomycetes)
Infraspecific name:
Strain: RMSCC 2394
BioSample:
SAMN02953671
Submitter:
Broad Institute
Date:
2006/11/02
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000149895.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
AATX01

IDs: 172988 [UID] 172988 [GenBank]

See Genome Information for Coccidioides immitis

There are 4 assemblies for this organism

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History (Show revision history)

Comment

Annotation was added to the scaffolds in July 2015

Global statistics

Total sequence length28,908,395
Total assembly gap length469,605
Gaps between scaffolds0
Number of scaffolds31
Scaffold N503,573,598
Scaffold L504
Number of contigs527
Contig N50160,055
Contig L5059
Total number of chromosomes and plasmids1

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced28,816,9062328,348,8223,573,5984940
MoleculeSequence RoleTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
Mitochondrion MTAllAssembled moleculeUnlocalized scaffolds91,489091,48980889,968089,96822,422022,422202000