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ALMONDv2

Organism name:
Prunus dulcis (almond)
BioSample:
SAMEA5704668
BioProject:
PRJEB32994
Submitter:
CNAG
Date:
2019/10/10
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_902201215.1 (latest)
RefSeq assembly accession:
GCF_902201215.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome Pltd (in non-nuclear assembly-unit)
  • Data displayed for RefSeq version
WGS Project:
CABIKO01
Genome coverage:
800x

IDs: 4930911 [UID] 14559648 [GenBank] 19500628 [RefSeq]

See Genome Information for Prunus dulcis

There are 2 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length227,756,880
Total ungapped length223,845,747
Gaps between scaffolds0
Number of scaffolds692
Scaffold N5024,375,383
Scaffold L504
Number of contigs4,396
Contig N50115,247
Contig L50511
Total number of chromosomes and plasmids9
Number of component sequences (WGS or clone)1,700

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
Assembly Unit: Primary Assembly (GCF_902201214.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1LR694006.1=NC_047650.10
Chromosome 2LR694007.1=NC_047651.10
Chromosome 3LR694008.1=NC_047652.10
Chromosome 4LR694009.1=NC_047653.10
Chromosome 5LR694010.1=NC_047654.10
Chromosome 6LR694011.1=NC_047655.10
Chromosome 7LR694012.1=NC_047656.10
Chromosome 8LR694013.1=NC_047657.10
unplacedn/an/an/a683

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All227,599,157691223,688,02424,375,3833,7040
Chromosome 143,996,934143,325,47443,996,9345960
Chromosome 226,138,581125,524,35926,138,5814640
Chromosome 324,073,526123,767,31024,073,5264050
Chromosome 424,375,383123,945,48324,375,3834730
Chromosome 518,233,718117,956,32118,233,7182350
Chromosome 629,596,931129,198,45429,596,9315010
Chromosome 721,340,587121,127,53821,340,5873000
Chromosome 820,428,636120,048,03020,428,6363250
unplaced19,414,86168318,795,05540,9194050
MoleculeTotal
Length
Plastid Pltd157,723
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