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IMG-taxon 2671180090 annotated assembly

Organism name:
Streptomyces sp. 2231.1 (high G+C Gram-positive bacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: 2231.1
BioSample:
SAMN05216532
BioProject:
PRJEB16460
Submitter:
DOE - JOINT GENOME INSTITUTE
Date:
2016/10/22
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_900105605.1 (latest)
RefSeq assembly accession:
GCF_900105605.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
FNTO01
Genome coverage:
135x

IDs: 867461 [UID] 3640278 [GenBank] 4892848 [RefSeq]

See Genome Information for Streptomyces sp. 2231.1

Pathogen Detection Resources

History (Show revision history)

Comment

Global statistics

Total sequence length9,263,372
Total ungapped length9,263,372
Number of contigs3
Contig N508,816,858
Contig L501
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)3

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced9,263,37239,263,3728,816,85800

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces sp. 2231.1Streptomyces sp. 2231.1

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_014650035.1Streptomyces lucensistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type89.0854.5265.20

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-mismatchna
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