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IMG-taxon 2687453810 annotated assembly

Organism name:
Streptomyces sp. TLI_105 (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: TLI_105
BioSample:
SAMN05428939
BioProject:
PRJEB16374
Submitter:
DOE - JOINT GENOME INSTITUTE
Date:
2016/10/22
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_900105415.1 (latest)
RefSeq assembly accession:
GCF_900105415.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
FNSM01
Genome coverage:
109x

IDs: 868831 [UID] 3643018 [GenBank] 4893708 [RefSeq]

See Genome Information for Streptomyces sp. TLI_105

History (Show revision history)

Comment

Global statistics

Total sequence length8,876,291
Total ungapped length8,876,291
Number of contigs2
Contig N508,586,973
Contig L501
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)2

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced8,876,29128,876,2918,586,97300

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces sp. TLI_105Streptomyces sp. TLI_105

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_014649755.1Streptomyces litmocidinitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type94.8270.6478.63

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna