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IMG-taxon 2657245720 annotated assembly

Organism name:
Streptomyces sp. Termitarium-T10T-6 (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: Termitarium-T10T-6
BioSample:
SAMN04883157
BioProject:
PRJEB14573
Submitter:
DOE - JOINT GENOME INSTITUTE
Date:
2016/08/13
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Excluded from RefSeq:
  • many frameshifted proteins
GenBank assembly accession:
GCA_900091795.1 (latest)
RefSeq assembly accession:
GCF_900091795.1 (suppressed)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
FMCO01
Genome coverage:
42x

IDs: 781961 [UID] 3385908 [GenBank] 8360788 [RefSeq]

See Genome Information for Streptomyces sp. Termitarium-T10T-6

History (Show revision history)

Comment

Global statistics

Total sequence length7,757,615
Total ungapped length7,757,615
Number of contigs837
Contig N5014,385
Contig L50148
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)837

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced7,757,6158377,757,61514,38500

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces sp. Termitarium-T10T-6Streptomyces sp. Termitarium-T10T-6

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_008632535.1Streptomyces parvustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type98.1183.7581.36

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna
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