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ASM1362390v1

Organism name:
Brevibacterium sediminis (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: FXJ8.269
BioSample:
SAMN14819567
BioProject:
PRJNA630003
Submitter:
Third Institute Of Oceanography,MNR
Date:
2020/07/24
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_013623905.1 (latest)
RefSeq assembly accession:
GCF_013623905.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JABKDD01
Assembly method:
HGAP v. 4
Expected final version:
yes
Genome coverage:
56.0x
Sequencing technology:
PacBio Sequel

IDs: 7473381 [UID] 20671668 [GenBank] 21195028 [RefSeq]

See Genome Information for Brevibacterium sediminis

There are 4 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length4,173,147
Total ungapped length4,173,147
Number of contigs43
Contig N50277,933
Contig L505
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)43

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced4,173,147434,173,147277,93300

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Brevibacterium sediminisBrevibacterium sediminis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_014643055.1Brevibacterium sediministype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_014643055.1Brevibacterium sediministype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9999.9699.90
Best-match type99.9999.9699.90

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna