U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



Try the new Datasets Genome page

Zerene_cesonia_1.1

Organism name:
Zerene cesonia (dogface butterfly)
Infraspecific name:
Ecotype: Mississippi
Sex:
female
BioSample:
SAMN13981747
BioProject:
PRJNA587792
Submitter:
University of Montana
Date:
2020/10/02
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_012273895.2 (latest)
RefSeq assembly accession:
GCF_012273895.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in GenBank: chromosome MT (in non-nuclear assembly-unit)
  • Data displayed for RefSeq version
WGS Project:
JAAMXH01
Assembly method:
Meraculuous v. MAR-2017; HiRise v. MAR-2017; Haplomerger v. MAR-2017
Expected final version:
yes
Genome coverage:
195.0x
Sequencing technology:
Illumina HiSeq

IDs: 8220591 [UID] 22448288 [GenBank] 24218188 [RefSeq]

See Genome Information for Zerene cesonia

History (Show revision history)

Comment

Global statistics

Total sequence length266,405,969
Total ungapped length257,292,430
Gaps between scaffolds0
Number of scaffolds275
Scaffold N509,214,832
Scaffold L5013
Number of contigs11,017
Contig N5043,484
Contig L501,786
Total number of chromosomes and plasmids29
Number of component sequences (WGS or clone)275

Supplemental Content

PubMed articles for this assembly

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_012274055.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1CM022603.1=NC_052102.10
Chromosome 2CM022604.1=NC_052103.10
Chromosome 3CM022605.1=NC_052104.10
Chromosome 4CM022606.1=NC_052105.10
Chromosome 5CM022607.1=NC_052106.10
Chromosome 6CM022608.1=NC_052107.10
Chromosome 7CM022609.1=NC_052108.10
Chromosome 8CM022610.1=NC_052109.10
Chromosome 9CM022611.1=NC_052110.10
Chromosome 10CM022612.1=NC_052111.10
Chromosome 11CM022613.1=NC_052112.10
Chromosome 12CM022614.1=NC_052113.10
Chromosome 13CM022615.1=NC_052114.10
Chromosome 14CM022616.1=NC_052115.10
Chromosome 15CM022617.1=NC_052116.10
Chromosome 16CM022618.1=NC_052117.10
Chromosome 17CM022619.1=NC_052118.10
Chromosome 18CM022620.1=NC_052119.10
Chromosome 19CM022621.1=NC_052120.10
Chromosome 20CM022622.1=NC_052121.10
Chromosome ZCM022623.1=NC_052122.10
Chromosome 22CM022624.1=NC_052123.10
Chromosome 23CM025914.1=NC_052124.10
Chromosome 24CM022625.1=NC_052125.10
Chromosome 25CM022627.1=NC_052126.10
Chromosome 26CM022628.1=NC_052127.10
Chromosome 27CM022629.1=NC_052128.10
Chromosome 28CM022630.1=NC_052129.10
Chromosome 29CM022626.1=NC_052130.10
unplacedn/an/an/a246

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All266,405,969275257,292,4309,214,83210,7420
Chromosome 111,457,159111,067,01111,457,1594610
Chromosome 25,140,45614,979,3975,140,4561770
Chromosome 39,514,02619,201,9699,514,0263510
Chromosome 47,018,64016,782,2717,018,6402680
Chromosome 58,880,24418,588,4568,880,2443340
Chromosome 66,445,98416,221,1676,445,9842810
Chromosome 79,516,49519,163,4479,516,4954330
Chromosome 88,820,74018,527,5988,820,7403440
Chromosome 96,750,82516,526,4326,750,8252610
Chromosome 109,579,62919,240,2929,579,6293800
Chromosome 1110,965,134110,600,35110,965,1344430
Chromosome 126,714,88816,494,9856,714,8882610
Chromosome 1310,643,726110,282,40110,643,7264270
Chromosome 148,811,57818,520,1378,811,5783380
Chromosome 159,720,13119,381,5119,720,1313980
Chromosome 169,214,83218,925,6759,214,8323300
Chromosome 1710,612,497110,308,76910,612,4973360
Chromosome 189,686,14519,371,1049,686,1453590
Chromosome 1910,727,076110,351,20110,727,0764440
Chromosome 2010,844,740110,477,90810,844,7404180
Chromosome Z12,428,619112,258,89012,428,6191960
Chromosome 225,646,47515,452,4335,646,4752180
Chromosome 233,019,84812,912,5723,019,8481300
Chromosome 244,688,65514,498,2114,688,6552250
Chromosome 256,729,27216,491,6636,729,2722650
Chromosome 266,719,72416,484,4676,719,7242840
Chromosome 276,799,44216,542,3416,799,4422970
Chromosome 286,424,02716,211,7786,424,0272520
Chromosome 296,715,00516,502,7166,715,0052450
unplaced26,169,95724624,925,2772,907,9551,5860
Support Center