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Kamilah_GGO_v0

Organism name:
Gorilla gorilla gorilla (western lowland gorilla)
Infraspecific name:
Breed: western lowland gorilla
Isolate:
Kamilah (stud number 0661)
Sex:
female
BioSample:
SAMN11078986
BioProject:
PRJNA369439
Submitter:
University of Washington
Date:
2019/08/28
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_008122165.1 (latest)
RefSeq assembly accession:
GCF_008122165.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT (in non-nuclear assembly-unit)
  • Data displayed for RefSeq version
WGS Project:
SRLZ01
Assembly method:
FALCON v. (git hash: 91e700c4) Nov 2015
Expected final version:
no
Genome coverage:
66.9x
Sequencing technology:
PacBio RSII; Illumina

IDs: 4439481 [UID] 13447828 [GenBank] 13973658 [RefSeq]

See Genome Information for Gorilla gorilla

There are 7 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length3,044,872,214
Total ungapped length2,999,027,915
Gaps between scaffolds220
Number of scaffolds5,706
Scaffold N5026,116,462
Scaffold L5035
Number of contigs6,345
Contig N509,522,971
Contig L5074
Total number of chromosomes and plasmids25
Number of component sequences (WGS or clone)6,345

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
Assembly Unit: Primary Assembly (GCF_008122175.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1CM017847.1=NC_044602.10
Chromosome 2ACM017848.1=NC_044603.10
Chromosome 2BCM017849.1=NC_044604.10
Chromosome 3CM017850.1=NC_044605.10
Chromosome 4CM017851.1=NC_044606.10
Chromosome 5CM017852.1=NC_044607.10
Chromosome 6CM017853.1=NC_044608.1208
Chromosome 7CM017854.1=NC_044609.10
Chromosome 8CM017855.1=NC_044610.10
Chromosome 9CM017856.1=NC_044611.10
Chromosome 10CM017857.1=NC_044612.10
Chromosome 11CM017858.1=NC_044613.10
Chromosome 12CM017859.1=NC_044614.10
Chromosome 13CM017860.1=NC_044615.10
Chromosome 14CM017861.1=NC_044616.10
Chromosome 15CM017862.1=NC_044617.10
Chromosome 16CM017863.1=NC_044618.10
Chromosome 17CM017864.1=NC_044619.10
Chromosome 18CM017865.1=NC_044620.10
Chromosome 19CM017866.1=NC_044621.10
Chromosome 20CM017867.1=NC_044622.10
Chromosome 21CM017868.1=NC_044623.10
Chromosome 22CM017869.1=NC_044624.10
Chromosome XCM017870.1=NC_044625.10
unplacedn/an/an/a5,253

Assembly statistics

MoleculeSequence RoleTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
AllAssembled molecule3,044,855,8025,7052,999,011,50326,116,462639220
Chromosome 1Assembled molecule219,763,11420215,562,68120,124,4685319
Chromosome 2AAssembled molecule107,978,3073106,273,94391,810,830282
Chromosome 2BAssembled molecule127,988,5522127,578,793109,829,291141
Chromosome 3Assembled molecule193,158,67310192,702,84629,841,657159
Chromosome 4Assembled molecule187,801,4569185,704,65730,146,760278
Chromosome 5Assembled molecule160,656,23019158,006,37819,986,1905118
Chromosome 6AllAssembled moleculeUnlocalized scaffolds176,387,043168,483,1757,903,86822012208175,066,562167,162,6947,903,86892,976,96092,976,96039,8682121011110
Chromosome 7Assembled molecule148,261,78921146,056,11238,109,6043420
Chromosome 8Assembled molecule140,819,9308139,522,15046,417,076247
Chromosome 9Assembled molecule107,756,87712106,405,63034,092,9172011
Chromosome 10Assembled molecule127,481,20512126,492,95816,977,0952211
Chromosome 11Assembled molecule118,287,94714117,296,13919,511,6962013
Chromosome 12Assembled molecule128,803,2079127,354,09622,203,633268
Chromosome 13Assembled molecule92,570,210892,320,37247,956,35747
Chromosome 14Assembled molecule87,619,771686,183,17426,482,010225
Chromosome 15Assembled molecule76,908,0231275,396,9728,830,3532011
Chromosome 16Assembled molecule74,389,1851370,006,8807,360,7754212
Chromosome 17Assembled molecule90,905,695890,011,84517,030,353237
Chromosome 18Assembled molecule73,862,527373,364,65325,366,73692
Chromosome 19Assembled molecule48,390,0561543,175,7174,648,6024514
Chromosome 20Assembled molecule60,378,084758,535,60416,333,177226
Chromosome 21Assembled molecule32,685,706432,120,13413,846,71073
Chromosome 22Assembled molecule32,715,5511030,966,3493,665,221299
Chromosome XAssembled molecule149,490,4697147,158,57839,665,648296
unplacedAssembled molecule279,796,1955,253275,748,28098,586320
MoleculeTotal
Length
Mitochondrion MT16,412
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