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ASM412432v1

Organism name:
Streptomyces sp. L2 (high G+C Gram-positive bacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: L2
BioSample:
SAMN08895571
BioProject:
PRJNA449322
Submitter:
University of East Anglia
Date:
2019/01/31
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_004124325.1 (latest)
RefSeq assembly accession:
GCF_004124325.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
QBDT01
Assembly method:
HGAP v. 3
Expected final version:
yes
Genome coverage:
108.11x
Sequencing technology:
PacBio

IDs: 2224951 [UID] 8379808 [GenBank] 8427628 [RefSeq]

See Genome Information for Streptomyces sp. L2

History (Show revision history)

Comment

Bacteria and source DNA available from Prof. Matthew Hutchings, School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, NR4 7TJ.

Global statistics

Total sequence length8,073,926
Total ungapped length8,073,926
Number of contigs2
Contig N507,778,962
Contig L501
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)2

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced8,073,92628,073,9267,778,96200

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces sp. L2Streptomyces sp. L2

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_001513965.1Streptomyces cellostaticustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type87.6855.4645.73

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-mismatchna
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