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ASM384628v1

Organism name:
Streptomyces sp. ADI98-12 (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: ADI98-12
BioSample:
SAMN10372325
BioProject:
PRJNA503729
Submitter:
Bielefeld University
Date:
2018/11/26
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_003846285.1 (latest)
RefSeq assembly accession:
GCF_003846285.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
RPHA01
Assembly method:
Newbler v. 2.8
Expected final version:
yes
Genome coverage:
68.2x
Sequencing technology:
Illumina MiSeq

IDs: 2124241 [UID] 7950638 [GenBank] 7969938 [RefSeq]

See Genome Information for Streptomyces sp. ADI98-12

History (Show revision history)

Comment

Bacteria and source DNA available from Zotchev Lab, Department of Pharmacognosy, University of Vienna
Annotated using prokka v1.11 from http://www.vicbioinformatics.com

Global statistics

Total sequence length7,243,116
Total ungapped length7,074,381
Gaps between scaffolds0
Number of scaffolds10
Scaffold N501,598,443
Scaffold L502
Number of contigs269
Contig N5065,000
Contig L5033
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)269

Supplemental Content

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced7,243,116107,074,3811,598,4432590

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces sp. ADI98-12Streptomyces sp. ADI98-12

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_011170145.1Streptomyces gougerotiisuspected-type

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type99.6088.6487.36

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna
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