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ASM384618v1

Organism name:
Streptomyces sp. ADI96-02 (high G+C Gram-positive bacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: ADI96-02
BioSample:
SAMN10372321
BioProject:
PRJNA503724
Submitter:
Bielefeld University
Date:
2018/11/26
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_003846185.1 (latest)
RefSeq assembly accession:
GCF_003846185.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
RPGW01
Assembly method:
Newbler v. 2.8
Expected final version:
yes
Genome coverage:
64.8x
Sequencing technology:
Illumina MiSeq

IDs: 2124161 [UID] 7950518 [GenBank] 7969788 [RefSeq]

See Genome Information for Streptomyces sp. ADI96-02

History (Show revision history)

Comment

Bacteria and source DNA available from Zotchev Lab, Department of Pharmacognosy, University of Vienna
Annotated using prokka v1.11 from http://www.vicbioinformatics.com

Global statistics

Total sequence length6,989,279
Total ungapped length6,868,807
Gaps between scaffolds0
Number of scaffolds2
Scaffold N506,907,715
Scaffold L501
Number of contigs197
Contig N5067,230
Contig L5032
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)197

Supplemental Content

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced6,989,27926,868,8076,907,7151950

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces sp. ADI96-02Streptomyces sp. ADI96-02

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_014650675.1Streptomyces anulatustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type88.4761.1847.46

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-mismatchna
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