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ASM367595v1

Organism name:
Streptomyces rapamycinicus NRRL 5491 (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NRRL 5491
BioSample:
SAMN02604192
BioProject:
PRJNA489197
Submitter:
Novartis AG
Date:
2018/10/23
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_003675955.1 (latest)
RefSeq assembly accession:
GCF_003675955.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
QYCY01
Assembly method:
HGAP v. DEC-2014
Expected final version:
yes
Genome coverage:
159.0x
Sequencing technology:
PacBio RSII

IDs: 2027301 [UID] 7620948 [GenBank] 7637978 [RefSeq]

See Genome Information for Streptomyces rapamycinicus

There are 5 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length12,663,199
Total ungapped length12,663,199
Number of contigs4
Contig N506,854,462
Contig L501
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)4

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced12,663,199412,663,1996,854,46200

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces rapamycinicus NRRL 5491Streptomyces rapamycinicus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_024298965.1Streptomyces rapamycinicus NRRL 5491type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_024298965.1Streptomyces rapamycinicustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9998.44100.00
Best-match type99.9998.44100.00

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna
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