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ASM367532v1

Organism name:: Streptomyces dangxiongensis (high G+C Gram-positive bacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: Z022
BioSample:: SAMN10237529
BioProject:: PRJNA474356
Submitter:: Chinese Academy of Sciences
Date:: 2018/10/23
Assembly type:: na
Assembly level:: Complete Genome
Genome representation:: full
RefSeq category:: representative genome
Relation to type material:: assembly from type material
GenBank assembly accession:: GCA_003675325.1 (latest)
RefSeq assembly accession:: GCF_003675325.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
Assembly method:: FALCON v. version 0.3
Expected final version:: yes
Genome coverage:: 213.0x
Sequencing technology:: Illumina and Pacpio

IDs: 2026891 [UID] 7619948 [GenBank] 7635768 [RefSeq]

See Genome Information for Streptomyces dangxiongensis

Pathogen Detection Resources

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_003675325.1	=	GCF_003675325.1	ASM367532v1	Complete Genome	Latest GenBank, Latest RefSeq

Comment

The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
Bacteria and source DNA available from Binglin Zhang

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeq
Annotation Date::03/05/2022 07:44:46
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.0
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
Genes (total)::7,188
CDSs (total)::7,098
Genes (coding)::6,531
CDSs (with protein)::6,531
Genes (RNA)::90
rRNAs::6, 6, 6 (5S, 16S, 23S)
complete rRNAs::6, 6, 6 (5S, 16S, 23S)
tRNAs::69
ncRNAs::3
Pseudo Genes (total)::567
CDSs (without protein)::567
Pseudo Genes (ambiguous residues)::0 of 567
Pseudo Genes (frameshifted)::348 of 567
Pseudo Genes (incomplete)::298 of 567
Pseudo Genes (internal stop)::26 of 567
Pseudo Genes (multiple problems)::96 of 567
CRISPR Arrays::2
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	8,157,885
Total ungapped length	8,157,885
Total number of chromosomes and plasmids	2

Molecule name	GenBank sequence		RefSeq sequence
Chromosome	CP033073.1	=	NZ_CP033073.1
Plasmid unnamed1	CP033072.1	=	NZ_CP033072.1

Molecule	Total Length
All	8,157,885
Chromosome	8,085,191
Plasmid unnamed1	72,694

	ANI	Query coverage	Subject coverage
Declared type	na	na	na
Best-match type	89.68	58.93	54.46

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ASM367532v1

See Genome Information for Streptomyces dangxiongensis

Pathogen Detection Resources

History (Show revision history)

Comment

Genome-Annotation-Data

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