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ASM367173v1

Organism name:
Streptomyces sp. E1N211 (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: E1N211
BioSample:
SAMN10107881
BioProject:
PRJNA492833
Submitter:
Universite de Lorraine - Institut National de la Recherche Agronomique
Date:
2018/10/22
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_003671735.1 (latest)
RefSeq assembly accession:
GCF_003671735.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
RAII01
Assembly method:
CLC Genomics Workbench v. 6.5
Expected final version:
yes
Genome coverage:
50x
Sequencing technology:
Illumina

IDs: 2025531 [UID] 7615148 [GenBank] 7631948 [RefSeq]

See Genome Information for Streptomyces sp. E1N211

History (Show revision history)

Comment

Global statistics

Total sequence length7,318,313
Total ungapped length7,315,118
Gaps between scaffolds0
Number of scaffolds1
Scaffold N507,318,313
Scaffold L501
Number of contigs41
Contig N50367,417
Contig L508
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)1

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced7,318,31317,315,1187,318,313400

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces sp. E1N211Streptomyces sp. E1N211

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_014649935.1Streptomyces variabilistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type98.3385.8385.37

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna
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