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ASM367171v1

Organism name:
Streptomyces sp. E2N166 (high G+C Gram-positive bacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: E2N166
BioSample:
SAMN10107878
BioProject:
PRJNA492833
Submitter:
Universite de Lorraine - Institut National de la Recherche Agronomique
Date:
2018/10/22
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_003671715.1 (latest)
RefSeq assembly accession:
GCF_003671715.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
RAIF01
Assembly method:
CLC Genomics Workbench v. 6.5
Expected final version:
yes
Genome coverage:
60x
Sequencing technology:
Illumina

IDs: 2025521 [UID] 7615128 [GenBank] 7631988 [RefSeq]

See Genome Information for Streptomyces sp. E2N166

History (Show revision history)

Comment

Global statistics

Total sequence length7,907,728
Total ungapped length7,761,481
Gaps between scaffolds0
Number of scaffolds57
Scaffold N501,424,629
Scaffold L503
Number of contigs636
Contig N5024,832
Contig L5099
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)57

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced7,907,728577,761,4811,424,6295790

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces sp. E2N166Streptomyces sp. E2N166

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_001267885.1Streptomyces ambofacienstype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type90.9372.7667.29

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-mismatchna
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