U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



ASM363481v1

Organism name:
Streptomyces sp. 3211.6 (high G+C Gram-positive bacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: 3211.6
BioSample:
SAMN06272777
BioProject:
PRJNA363977
Submitter:
DOE Joint Genome Institute
Date:
2018/10/11
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_003634815.1 (latest)
RefSeq assembly accession:
GCF_003634815.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
RBXC01
Assembly method:
HGAP v. smrtanalysis/2.3.0_p5, HGAP 3
Expected final version:
no
Genome coverage:
226.0x
Sequencing technology:
PacBio

IDs: 2011221 [UID] 7561838 [GenBank] 7598168 [RefSeq]

See Genome Information for Streptomyces sp. 3211.6

Pathogen Detection Resources

History (Show revision history)

Comment

Global statistics

Total sequence length8,018,716
Total ungapped length8,018,716
Number of contigs3
Contig N507,431,091
Contig L501
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)3

Supplemental Content

Access the data

Assembly Information

Related Information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced8,018,71638,018,7167,431,09100

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces sp. 3211.6Streptomyces sp. 3211.6

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000966975.1Streptomyces katraetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type93.3973.2572.97

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-mismatchna
You are here: NCBI > Genomes & Maps > Assembly
Support Center