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ASM357404v1

Organism name:
Meiothermus taiwanensis (bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: JCM 15151
BioSample:
SAMN09908287
BioProject:
PRJNA487717
Submitter:
Biocant
Date:
2018/09/18
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Relation to type material:
assembly from synonym type material
GenBank assembly accession:
GCA_003574045.1 (latest)
RefSeq assembly accession:
GCF_003574045.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
QWKX01
Assembly method:
SPAdes v. 3.9.1
Expected final version:
yes
Genome coverage:
230.0x
Sequencing technology:
Illumina MiSeq

IDs: 1981891 [UID] 7458118 [GenBank] 7467798 [RefSeq]

See Genome Information for Meiothermus taiwanensis

There are 5 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,921,326
Total ungapped length2,921,326
Number of contigs177
Contig N5031,054
Contig L5031
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)177

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,921,3261772,921,32631,05400

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Meiothermus taiwanensisMeiothermus taiwanensis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
samena

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000024425.1Meiothermus rubertype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type91.7785.5280.66

ANI result

Taxonomy check statusBest match statusComment
OKbelow-threshold-mismatchAssembly is the type-strain, mismatch is within genus and expected