Full Report

Send to:

Choose Destination

File
Clipboard
Collections

Download Assembly

Source database (GenBank or RefSeq) File type

DanaRS2.1

Organism name:

Drosophila ananassae (flies)

Infraspecific name:

Strain: 14024-0371.16-18

Sex:

female

BioSample:

SAMN09383008

BioProject:

PRJNA475270

Submitter:

University of Arizona/ University of Chiago/ Cornell University

Date:

2018/10/23

Release type:

minor

Assembly level:

Contig

Genome representation:

full

Excluded from RefSeq:

superseded by newer assembly for species

GenBank assembly accession:

GCA_003285975.3 (latest)

RefSeq assembly accession:

GCF_003285975.2 (suppressed) see latest RefSeq assembly for this species

RefSeq assembly and GenBank assembly identical:

yes

WGS Project:

QMES02

Assembly method:

CANU v. 1.5; Pilon v. 1.18

Expected final version:

Genome coverage:

105.0x

Sequencing technology:

PacBio Sequel; Illumina

IDs: 5499641 [UID] 15958958 [GenBank] 15959238 [RefSeq]

See Genome Information for Drosophila ananassae

Pathogen Detection Resources

There are 7 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_003285975.3	=	GCF_003285975.2	DanaRS2.1	Contig	Latest GenBank, RefSeq suppressed
GCA_003285975.2	n/a	n/a	DanaRS2	Contig	Replaced GenBank
GCA_003285975.1	n/a	n/a	DanaRS1	Contig	Replaced GenBank

Comment

In January 2020 five contigs (QMES02000008.1, QMES02000009.1, QMES02000185.1, QMES02000186.1, QMES02000187.1) were suppressed because they were contaminants. The updated assembly is DanaRS2.1 (GCA_003285975.3).

Global statistics

Total sequence length	217,108,776
Total ungapped length	217,108,776
Number of contigs	235
Contig N50	6,212,830
Contig L50	7
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	235

Assembly

Genome Assembly

Result Filters

Organism group

Status

Assembly level

RefSeq category

Exclude

Annotation status

Taxonomy check status

Relation to type material

Assembly type

Sequence release date

Custom date range

Contig N50

Custom range

Scaffold N50

Custom range

Additional filters

Send to:

Download Assembly

DanaRS2.1

See Genome Information for Drosophila ananassae

Pathogen Detection Resources

There are 7 assemblies for this organism

History (Show revision history)

Comment

Global statistics

Supplemental Content

Access the data

Assembly Information

Related Information

Recent activity

Global assembly definition

Assembly statistics