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Cersp1

Organism name:
Ceraceosorus guamensis (basidiomycete fungi)
Infraspecific name:
Strain: MCA 4658
BioSample:
SAMN02919188
BioProject:
PRJNA254921
Submitter:
DOE Joint Genome Institute
Date:
2018/05/21
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_003144195.1 (latest)
RefSeq assembly accession:
GCF_003144195.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
MCHD01
Assembly method:
Allpaths-LG v. R49403
Genome coverage:
145x
Sequencing technology:
Illumina

IDs: 1717641 [UID] 6540478 [GenBank] 6832078 [RefSeq]

See Genome Information for Ceraceosorus guamensis

History (Show revision history)

Comment

URL -- http://genome.jgi.doe.gov/Cersp1
JGI Project ID: 1036212
The DNA was provided by Teeratas Kijpornyongpan (tkijporn@purdue.edu)
The strain is available from CBS culture collection
Contacts: Mary C. Aime (maime@purdue.edu)
Igor V. Grigoriev (ivgrigoriev@lbl.gov)
Assembly and annotation done by JGI.
The JGI and collaborators endorse the principles for ... the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376)  more

Global statistics

Total sequence length24,148,100
Total ungapped length24,121,162
Gaps between scaffolds0
Number of scaffolds251
Scaffold N50295,512
Scaffold L5028
Number of contigs356
Contig N50211,048
Contig L5037
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)356

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced24,148,10025124,121,162295,5121050