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CorkOak1.0

Organism name:
Quercus suber (cork oak)
Isolate:
HL8
BioSample:
SAMN07312269
BioProject:
PRJNA392919
Submitter:
Genosuber
Date:
2018/01/29
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_002906115.1 (replaced)
RefSeq assembly accession:
GCF_002906115.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
PKMF01
Assembly method:
Ray v. 2.3.1; BESST v. 2.2.5
Expected final version:
no
Genome coverage:
737.72x
Sequencing technology:
Illumina

IDs: 1547411 [UID] 5959478 [GenBank] 5996558 [RefSeq]

See Genome Information for Quercus suber

History (Show revision history)

Comment

Global statistics

Total sequence length953,298,670
Total ungapped length934,151,465
Gaps between scaffolds0
Number of scaffolds23,344
Scaffold N50465,160
Scaffold L50605
Number of contigs36,760
Contig N5080,917
Contig L503,351
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)23,344

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced953,298,67023,344934,151,465465,16013,4160
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