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ASM255130v1

Organism name:
Streptomyces sp. or20 (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: or20
BioSample:
SAMN07606153
BioProject:
PRJNA401484
Submitter:
Cornell University
Date:
2017/10/13
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_002551305.1 (latest)
RefSeq assembly accession:
GCF_002551305.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
NTHA01
Assembly method:
A5 v. FEB-2014
Expected final version:
yes
Genome coverage:
78.5x
Sequencing technology:
Illumina HiSeq

IDs: 1328141 [UID] 5344238 [GenBank] 5392428 [RefSeq]

See Genome Information for Streptomyces sp. or20

History (Show revision history)

Comment

Bacteria available from Daniel Buckley, School of Integrative Plant Science, Bradfield Hall 705, Cornell University, Ithaca, NY 14863.

Global statistics

Total sequence length9,079,700
Total ungapped length9,079,700
Number of contigs245
Contig N5081,082
Contig L5038
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)245

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced9,079,7002459,079,70081,08200

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces sp. or20Streptomyces sp. or20

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_014650675.1Streptomyces anulatustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type96.8785.1587.31

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna
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