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ASM255129v1

Organism name:
Streptomyces sp. or3 (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: or3
BioSample:
SAMN07606152
BioProject:
PRJNA401484
Submitter:
Cornell University
Date:
2017/10/13
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_002551295.1 (latest)
RefSeq assembly accession:
GCF_002551295.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
NTHB01
Assembly method:
A5 v. FEB-2014
Expected final version:
yes
Genome coverage:
76.4x
Sequencing technology:
Illumina HiSeq

IDs: 1328111 [UID] 5344228 [GenBank] 5469468 [RefSeq]

See Genome Information for Streptomyces sp. or3

History (Show revision history)

Comment

Bacteria available from Daniel Buckley, School of Integrative Plant Science, Bradfield Hall 705, Cornell University, Ithaca, NY 14862.

Global statistics

Total sequence length8,929,626
Total ungapped length8,929,626
Number of contigs228
Contig N5070,290
Contig L5035
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)228

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced8,929,6262288,929,62670,29000

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces sp. or3Streptomyces sp. or3

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_014650675.1Streptomyces anulatustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type99.1791.8292.59

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna
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