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ASM255114v1

Organism name:
Streptomyces sp. st115 (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: st115
BioSample:
SAMN07606160
BioProject:
PRJNA401484
Submitter:
Cornell University
Date:
2017/10/13
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_002551145.1 (latest)
RefSeq assembly accession:
GCF_002551145.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
NTGT01
Assembly method:
A5 v. FEB-2014
Expected final version:
yes
Genome coverage:
44.6x
Sequencing technology:
Illumina HiSeq

IDs: 1328011 [UID] 5343978 [GenBank] 5469168 [RefSeq]

See Genome Information for Streptomyces sp. st115

History (Show revision history)

Comment

Bacteria available from Daniel Buckley, School of Integrative Plant Science, Bradfield Hall 705, Cornell University, Ithaca, NY 14870.

Global statistics

Total sequence length8,345,486
Total ungapped length8,345,486
Number of contigs559
Contig N5029,129
Contig L5086
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)559

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced8,345,4865598,345,48629,12900

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces sp. st115Streptomyces sp. st115

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_014655335.1Streptomyces griseussyntype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type98.8590.4993.68

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna
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