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vjacob_1.0

Organism name:
Varroa jacobsoni (mites & ticks)
Isolate:
VJ856
Sex:
male
BioSample:
SAMN07256664
BioProject:
PRJNA391052
Submitter:
Okinawa Institute of Science and Technology
Date:
2017/10/10
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_002532875.1 (latest)
RefSeq assembly accession:
GCF_002532875.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
NJHO01
Assembly method:
Newbler v. 2.6
Expected final version:
yes
Genome coverage:
57.0x
Sequencing technology:
Illumina HiSeq

IDs: 1318801 [UID] 5319738 [GenBank] 5362348 [RefSeq]

See Genome Information for Varroa jacobsoni

History (Show revision history)

Global statistics

Total sequence length365,585,945
Total ungapped length365,177,037
Gaps between scaffolds0
Number of scaffolds4,881
Scaffold N50233,810
Scaffold L50482
Number of contigs8,241
Contig N5096,009
Contig L501,168
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)8,241

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced365,585,9454,881365,177,037233,8103,3600
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