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ASM228890v2

Organism name:
Enhydra lutris kenyoni (sea otter)
Isolate:
GAN:26980312
Sex:
male
BioSample:
SAMN07211055
BioProject:
PRJNA388419
Submitter:
BC Cancer Agency
Date:
2017/09/11
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_002288905.2 (latest)
RefSeq assembly accession:
GCF_002288905.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT (in non-nuclear assembly-unit)
  • Data displayed for RefSeq version
WGS Project:
NSES01
Assembly method:
ABySS - Supernova hybrid v. 2.0.1 - 1.1.5
Expected final version:
yes
Genome coverage:
110.0x
Sequencing technology:
Illumina HiSeqX

IDs: 1200241 [UID] 5018748 [GenBank] 5028978 [RefSeq]

See Genome Information for Enhydra lutris

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,455,276,666
Total ungapped length2,425,594,289
Gaps between scaffolds0
Number of scaffolds6,771
Scaffold N5038,751,465
Scaffold L5020
Number of contigs29,592
Contig N50244,529
Contig L502,959
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)29,592

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,455,260,2356,7702,425,577,85838,751,46522,8210
MoleculeTotal
Length
Mitochondrion MT16,431
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