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ASM215455v1

Organism name:
Streptomyces murinus (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NRRL B-2286
BioSample:
SAMN06282499
BioProject:
PRJNA293375
Submitter:
USDA/ARS/NCAUR
Date:
2017/05/22
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_002154555.1 (latest)
RefSeq assembly accession:
GCF_002154555.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
MUNF01
Assembly method:
CLCbio Genomics Workbench v. 9.5.3
Expected final version:
yes
Genome coverage:
100.0x
Sequencing technology:
Illumina MiSeq

IDs: 1109971 [UID] 4493308 [GenBank] 4529078 [RefSeq]

See Genome Information for Streptomyces murinus

There are 6 assemblies for this organism

See more

History (Show revision history)

Comment

Bacteria and source DNA available from ARS Culture Collection, Peoria, IL USA.

Global statistics

Total sequence length7,954,566
Total ungapped length7,950,851
Gaps between scaffolds0
Number of scaffolds1,088
Scaffold N5014,213
Scaffold L50171
Number of contigs1,176
Contig N5014,168
Contig L50173
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)1,088

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced7,954,5661,0887,950,85114,213880

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces murinusStreptomyces murinus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_014138905.1Streptomyces murinussyntype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_014138905.1Streptomyces murinussyntype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type97.2984.0978.42
Best-match type97.2984.0978.42

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna
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